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AZM5
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Maize sequences generated from methylation filtered and high Cot genomic DNA clones were first
repeat-masked with a filtering module from the Paracel Transcript Assembler package
(Paracel Inc.) using the Maize Repeat Database and the
TIGR cereal repeat databases
as references.
The repeat-masked sequences were clustered by sequence similarity or clone links to produce
'clustered' and 'singleton' sequences. Following assembly of the clustered sequences
[2],
a consensus sequence was determined for each assembly, called an 'AZM'
(Assembled Zea mays) sequence. Those 'clustered' sequences failing to form an AZM
were added to the 'singletons'. Here
is an overview of the assembly process.
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| Search AZM assembly report |
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