Release 5.0 MF


Detailed assembly statistics
 
  All libraries
Starting data (reads) 547,022
% masked -
% GC 49
 
Assembled Zea mays (AZMs) 80,927
     Average number of reads per AZM 5.54
     Average length of AZMs (bp) 1,515
     Maximum length of AZM (bp) 21,005
Singleton sequences 99,075
Total AZM and singleton sequences 180,002


Clone statistics
 
  All libraries
Plasmid clones 310,935
Clustered clones* 199,101
     Average number of clones per AZM 3.36
     Maximum number of clones per AZM 231
Singleton clones** 51,964
Split clones*** 59,870


*Clustered clones = Clones that have been successfully assembled into AZMs with other clones
**Singleton clones = Clones that have failed to form an assembly with other clones (may consist of single end reads or overlapping paired end reads)
***Split clones = Clones for which the paired end reads assembled into separate AZMs